Data acquisition on the Echo® MS system: post-acquisition file splitting by Anuja Bhalkikar | Sep 14, 2023 | Data acquisition, Echo® MS+ system, SCIEX information, TechnologyThe Echo® MS system is an ultra-high-throughput system that analyzes samples at a speed of up to 1 sample per second. To achieve fast acquisition speeds, MS data is collected for an entire batch—or the entire well plate—into a single experiment in a file....
Acoustic Ejection Mass Spectrometry at ASMS 2023 by Christie Hunter | Jun 4, 2023 | Echo® MS+ system, SCIEX information, TechnologyFor all those interested in learning about all the cool applications possible with AEMS and the Echo MS system, here is a list of presentations at ASMS 2023. Monday: MOH 3:50pm – Intact protein analysis MP 294 – Metabolite identification MP 312 Compound QC Tuesday TOB...
Optimized rolling collision energy curves for IDA and SWATH DIA for peptides by Christie Hunter | Apr 18, 2023 | Data acquisition, Life Science Research, Proteomics, QTOF, SCIEX information, ZenoTOF 7600 systemDuring data dependent acquisition (DDA or IDA) or SWATH acquisition, the collision energy can be automatically adjusted according to the mass/charge and charge of the peptide. This dependency has been well characterized on our QTOF systems. By selecting rolling...
Methods for OPI electrode cleaning for Echo® MS system electrodes by Christie Hunter | Nov 23, 2022 | Echo® MS+ system, Instrument maintenance, SCIEX information, TechnologyDepending on the samples you are running on the system, it is possible for the Open Port Interface (OPI) electrode to become dirty or occluded over time. Below are two different cleaning strategies that can help you maintain your Echo® MS system and keep your OPI...
New features in OneOmics suite by April Quinn-Paquet | Sep 22, 2022 | Bioanalysis/PK, Biopharma, Genomics, Life Science Research, Lipidomics, Metabolomics, Multi-Omics, OneOmics, Pharma, Proteomics, SCIEX information, SoftwareI just wanted to thank the readers here, both the OneOmics suite users who’ve shared their time and watched OneOmics grow, and for all the talented developers and scientists who’ve made OneOmics suite what it is today.
Get started with these easy-to-implement methods for global lipid profiling by Christie Hunter | Jul 6, 2022 | Life Science Research, Lipidomics, Methods / workflows, QTRAP / Triple Quad, SCIEX informationLipidomics Quantification of lipids in complex biological samples is challenging and often requires a detailed knowledge of lipids and lipid analysis methods. The inherent complexity of the lipidome means that identifying and quantifying different lipid classes and...
Current proteomics software compatibility for ZenoTOF 7600 system by Christie Hunter | May 20, 2022 | Data processing, Life Science Research, Proteomics, SCIEX information, ZenoTOF 7600 systemBelow is a summary of various other software packages that are useful for processing proteomics data from the ZenoTOF 7600 system. Note this list is not comprehensive and only covers the tools we have lightly tested to date. Acquisition Type Software Files needed...
Easy switching of sources and LC flow regimes on the ZenoTOF 7600 system by Christie Hunter | May 9, 2022 | Data acquisition, Ion sources, Life Science Research, Proteomics, SCIEX information, ZenoTOF 7600 systemThis series of videos outlines how a user can easily switch sources and operate the system in different LC flow regimes.
Automation integration for the Echo® MS system by Christie Hunter | May 7, 2022 | Echo® MS+ system, Sample Preparation, SCIEX information, TechnologyThe Echo® MS system is specifically designed to be compatible with a variety of automation options to allow labs the flexibility to personalize their setup to meet their specific needs. To help you make the best decisions for your own lab, here are the answers to some...
Creating a library from a FASTA file for library-free data analysis by Christie Hunter | Apr 29, 2022 | Data processing, Life Science Research, Proteomics, SCIEX information, ZenoTOF 7600 systemWhile generating proteomic spectral libraries today is relatively easy, sometimes a library is needed and there is not time or need to generate a deep library using the traditional data-dependent acquisition approach. Here, a strategy will be outlined to generate a...