I just wanted to thank the readers here, both the OneOmics suite users who’ve shared their time and watched OneOmics grow, and for all the talented developers and scientists who’ve made OneOmics suite what it is today.

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by April Quinn-Paquet | Sep 22, 2022 | Bioanalysis/PK, Biopharma, Genomics, Life Science Research, Lipidomics, Metabolomics, Multi-Omics, OneOmics, Pharma, Proteomics, SCIEX information, Software
I just wanted to thank the readers here, both the OneOmics suite users who’ve shared their time and watched OneOmics grow, and for all the talented developers and scientists who’ve made OneOmics suite what it is today.
by Roz Jenkins | May 25, 2022 | Data processing, Life Science Research, ProteinPilot, Proteomics, QTOF, Questions
I have prepared a spectral library for a phosphopeptide enriched sample and I am generating my SWATH samples from similarly enriched samples. The problem is that when I use DIA-NN for the retention time alignment and quant, it doesn’t recognise the terminology of the spectral library annotated by ProteinPilot. DIA-NN recognises Unimod:21 for phosphorylation, but PP uses phospho(Tyr) etc. Other than changing the data dictionary to get around the mismatch, anyone have any suggestions for how I might resolve this? Thank you, Roz
by Adrian Brown | May 12, 2022 | Data processing, ProteinPilot, Proteomics, QTOF, Questions
I would like to use ProteinPilot 5.0.2 to process data-sets containing 16 wiff files acquired from fractionated peptides on a 6600 TripleTOF. A Precision T7910 workstation struggles to process four files in parallel and I would like to be able to queue sequential processing of individual files overnight. I currently use the ‘LC ‘ tab to load and process individual data-files but this leads to parallel processing. Is it possible to generate 16 .group files sequentially?
by Alexandra Antonoplis | Apr 29, 2022 | Data acquisition, Life Science Research, Proteomics, SCIEX information, SCIEX OS software, ZenoTOF
For nanoflow workflows using the ZenoTOF 7600 system and the standard nanoflow interface, on-column calibration is required and can be incorporated automatically into the SCIEX OS software acquisition batch. Here, step-by-step instructions are provided to set up a...
by Alexandra Antonoplis | Apr 29, 2022 | Data acquisition, Ion sources, Life Science Research, Proteomics, QTOF, QTRAP / Triple Quad, SCIEX information, SCIEX OS software, ZenoTOF
When analyzing highly complex samples from biological matrices, there can be significant amounts of material that elute in the wash cycle of the LC run, depending on the up-front sample preparation used. The Scheduled Ionization mode, available in both SCIEX OS...
by Riyo Imamura | Apr 11, 2022 | Discovery, Echo MS, Questions, SCIEX OS software
I think EchoMS is powerful tool for high-throughput MS and it would be even better if the Discovery Quant function could be used in SCIEX-OS. I think it will be possible by using the infusion mode.
by Riyo Imamura | Apr 6, 2022 | Agriculture, Echo MS, Questions, SCIEX OS software, Technology
We found the dispensing log in the folder at C:\ProgramData\SCIEX\EchoMS\Data.
by Mackenzie Pearson | Feb 24, 2022 | Bioanalysis/PK, Data processing, Data Visualization, Echo MS, Pharma, SCIEX information, SCIEX OS software
This excel workbook is designed to be used with data copied from a SCIEX OS software Analytics module results file